Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVNLIMTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
1K78 Chain:A ((31-77))
-------------RPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14437 for 284 contacts (-50.8/contact) +
2D Compatibility (PS) -5094 + (NN) -3086 + (LL) 5156
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -20711.0 ( -72.93 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: