Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSL-DKQKFKGAYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDHVMNEFNGEVK
3WH4 Chain:A ((7-191))
ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPN-FHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQ-GQVPQAMNQIN----
General information:
TITO was launched using:
RESULT:
Template:
3WH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123407 for 1561 contacts (-79.1/contact) +
2D Compatibility (PS) -19024 + (NN) -1992 + (LL) 360
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -159763.0 ( -102.35 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3WH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WH4-query.scw
PDB file :
Tito_Scwrl_3WH4.pdb
: