Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILD---ELKMTLSH-VEADEFSTFASKILHAEHIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1JEO Chain:A ((4-179))
---LEELDIVSNNILILKKFYTNDEWKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECG-NVVEFADLTIPLEVKKS-----KYLPMGTTFEETALIFLDLVIAEIMKRLNLDESEIIKRHCNL-
General information:
TITO was launched using:
RESULT:
Template:
1JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86709 for 1336 contacts (-64.9/contact) +
2D Compatibility (PS) -19181 + (NN) -10467 + (LL) 560
1D Compatibility (HY) -16800 + (ID) 2750
Total energy: -135347.0 ( -101.31 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JEO-query.scw
PDB file :
Tito_Scwrl_1JEO.pdb
: