Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPH--LQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
3FCL Chain:A ((21-222))
---------------FIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE---
General information:
TITO was launched using:
RESULT:
Template:
3FCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99886 for 1582 contacts (-63.1/contact) +
2D Compatibility (PS) -21465 + (NN) -9012 + (LL) 1424
1D Compatibility (HY) -17600 + (ID) 4900
Total energy: -151439.0 ( -95.73 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_3FCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCL-query.scw
PDB file :
Tito_Scwrl_3FCL.pdb
: