Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLS-GAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPL----MEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETF------TINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK- |
| 1XSE Chain:A ((22-295)) | NEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAA-SAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCILGLIDTETAIKAT--------------SGIYLGPASP---------------KEECALEIIKGTA--LRQDEMYYV-------GSRWVPYLLGNPGRKIMEFLSAAEY--NWDNVLSNEKLYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33446 for 2098 contacts (-15.9/contact) +
2D Compatibility (PS) -28316 + (NN) -9754 + (LL) 3204
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -75212.0 ( -35.85 by residue)
QMean score : 0.257
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