Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPIIAGNWKMNKTVQEAKDFVNALP-TLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
2BTM Chain:B ((1-250))-RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRL---VQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPASFLQLVEAGR


General information:
TITO was launched using:
RESULT:

Template: 2BTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86754 for 2218 contacts (-39.1/contact) +
2D Compatibility (PS) -27552 + (NN) -16415 + (LL) 456
1D Compatibility (HY) -25200 + (ID) 7300
Total energy: -162765.0 ( -73.38 by residue)
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_2BTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BTM-query.scw
PDB file : Tito_Scwrl_2BTM.pdb: