Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGAD----VICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
2YAN Chain:A ((19-84))
VMLFMKGNKQEAKCGFSK------QILEILNST--------GVEYETFDILEDEE----VRQGLKAYS--NWPTYPQLYVKGELVG--------------------
General information:
TITO was launched using:
RESULT:
Template:
2YAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52046 for 388 contacts (-134.1/contact) +
2D Compatibility (PS) -6284 + (NN) 1005 + (LL) 2384
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -58291.0 ( -150.23 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2YAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YAN-query.scw
PDB file :
Tito_Scwrl_2YAN.pdb
: