Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYSIIQDNPGLLRRPIILDNKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRMVD
1S3C Chain:A ((3-123))
NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGA----------
General information:
TITO was launched using:
RESULT:
Template:
1S3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68083 for 905 contacts (-75.2/contact) +
2D Compatibility (PS) -12693 + (NN) -4122 + (LL) 1208
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -90490.0 ( -99.99 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1S3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3C-query.scw
PDB file :
Tito_Scwrl_1S3C.pdb
: