Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQSSKQQTPKIKKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSNNAETQVNQNITVTGYPG-DKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNG---AVFINENVRNFLKQNIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPDAA |
4K1T Chain:B ((26-205)) | -------------------------------------------------------------------------------------------------------ATGFVVGKNTILTNKHVSKNYKVGD--RITAHP---NSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYA--AGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFAS---DDNRNAYGVYFTPEIKKFIAENID--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44970 for 1271 contacts (-35.4/contact) +
2D Compatibility (PS) -18223 + (NN) -9910 + (LL) 1656
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -86297.0 ( -67.90 by residue)
QMean score : 0.438
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