Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKGRLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLKQLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGSLIETYQIFLNKLEDLK
2Z02 Chain:B ((14-239))
---LYSGKAKSIYEIDDDKVL-IEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERL----
General information:
TITO was launched using:
RESULT:
Template:
2Z02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69631 for 1785 contacts (-39.0/contact) +
2D Compatibility (PS) -24150 + (NN) -3917 + (LL) 804
1D Compatibility (HY) -23200 + (ID) 5400
Total energy: -125494.0 ( -70.30 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_2Z02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z02-query.scw
PDB file :
Tito_Scwrl_2Z02.pdb
: