Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKK-----PVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
1WMT Chain:A ((2-41)) | --------------------HTNIPCRGTSDCYEPCEKKYNCARAKCMNRHCNCYNNCPW-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10022 for 202 contacts (49.6/contact) +
2D Compatibility (PS) -3706 + (NN) -5 + (LL) 10352
1D Compatibility (HY) -800 + (ID) 500
Total energy: 15363.0 ( 76.05 by residue)
QMean score : -0.077
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