Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
2QFF Chain:A ((9-82))
-----------------------------------------EYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKA-YALKSKDFKKMSEAKYQLQKIYNEIDEALK-
General information:
TITO was launched using:
RESULT:
Template:
2QFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25210 for 465 contacts (-54.2/contact) +
2D Compatibility (PS) -8193 + (NN) -5414 + (LL) 3008
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -42159.0 ( -90.66 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2QFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QFF-query.scw
PDB file :
Tito_Scwrl_2QFF.pdb
: