Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKIVVALGGNAL---GKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGK--VGTVIKK
2WE4 Chain:B ((4-310))--KMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQ-QQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAM-QAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQE---LKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITSLENL-GSMSGDEIVGTVVTK


General information:
TITO was launched using:
RESULT:

Template: 2WE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148573 for 2511 contacts (-59.2/contact) +
2D Compatibility (PS) -32778 + (NN) -12099 + (LL) 312
1D Compatibility (HY) -27200 + (ID) 7650
Total energy: -227988.0 ( -90.80 by residue)
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_2WE4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WE4-query.scw
PDB file : Tito_Scwrl_2WE4.pdb: