Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTT-LEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGD-LSVSFKRTKDIL------KYLGEHKTSQYLIGFAAETEDIEN----YAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ |
| 4QJI Chain:B ((14-228)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KALVTAGGTREPLDPVRFIGNRSSGKQGYAVARVLAQRGADVTLIAGNTAGLIDPAGVEMVHIGSATQLRDAVSKHAPDANVLVMAAAVADFRPAHVAAAKIKKGASEPSSIDLVRNDDVLAGAVRARADGQLPNMRAIVGFAAETGDANGDVLFHARAKLERKGCDLLVVN--------------DGWLLSADGTESALEHGSKTLMATRIVDSI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72329 for 1457 contacts (-49.6/contact) +
2D Compatibility (PS) -21101 + (NN) -12185 + (LL) 14736
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -105029.0 ( -72.09 by residue)
QMean score : 0.536
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