Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
4WK6 Chain:C ((13-249))
----KVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVASVVG------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY-
General information:
TITO was launched using:
RESULT:
Template:
4WK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113602 for 1937 contacts (-58.6/contact) +
2D Compatibility (PS) -24701 + (NN) -3481 + (LL) 928
1D Compatibility (HY) -20400 + (ID) 6450
Total energy: -167706.0 ( -86.58 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4WK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WK6-query.scw
PDB file :
Tito_Scwrl_4WK6.pdb
: