Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLL--TNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
3KXA Chain:A ((69-123))
------GGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSK---QSLQDKTVQKLANALGVS------
General information:
TITO was launched using:
RESULT:
Template:
3KXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2052 for 304 contacts (-6.8/contact) +
2D Compatibility (PS) -5443 + (NN) 250 + (LL) 1212
1D Compatibility (HY) 800 + (ID) 450
Total energy: -5683.0 ( -18.69 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_3KXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KXA-query.scw
PDB file :
Tito_Scwrl_3KXA.pdb
: