Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK
1SNC Chain:A ((16-141))----------------------------------------------------KAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS-


General information:
TITO was launched using:
RESULT:

Template: 1SNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2373 for 944 contacts (2.5/contact) +
2D Compatibility (PS) -13275 + (NN) -6140 + (LL) 4188
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -24554.0 ( -26.01 by residue)
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_1SNC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SNC-query.scw
PDB file : Tito_Scwrl_1SNC.pdb: