Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKN--YSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFTLPMSVFDDLYEEYTEWLKF-----
2KVS Chain:A ((1-80))
MAGDPMTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYVMSNYTDHQLIETTNRAISLYMANLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25438 for 429 contacts (-59.3/contact) +
2D Compatibility (PS) -7732 + (NN) -1993 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -39563.0 ( -92.22 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2KVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVS-query.scw
PDB file :
Tito_Scwrl_2KVS.pdb
: