Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF |
| 3EFR Chain:A ((11-161)) | ------------------------------------------------------------------------------------------VDSTQERLKEWNVSYGTA--LVADRQTKGRGGLGRKWLSQEG-GLYFSFLLNPK-EFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKDK-----LIVGIGINVNQR--EIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRI----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73093 for 1219 contacts (-60.0/contact) +
2D Compatibility (PS) -16389 + (NN) -7137 + (LL) 12208
1D Compatibility (HY) -16000 + (ID) 2700
Total energy: -103111.0 ( -84.59 by residue)
QMean score : 0.340
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