Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEY--ELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
3PDE Chain:B ((13-265))------DQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATD-LPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS-----------DADEAKNTYPGKLGLIGANQAL-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -71141 for 1924 contacts (-37.0/contact) +
2D Compatibility (PS) -26138 + (NN) -15206 + (LL) 3732
1D Compatibility (HY) -16800 + (ID) 5150
Total energy: -130703.0 ( -67.93 by residue)
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_3PDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PDE-query.scw
PDB file : Tito_Scwrl_3PDE.pdb: