Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
2QTR Chain:B ((1-188))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
2QTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157654 for 1494 contacts (-105.5/contact) +
2D Compatibility (PS) -20200 + (NN) -8245 + (LL) 44
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -208405.0 ( -139.49 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2QTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTR-query.scw
PDB file :
Tito_Scwrl_2QTR.pdb
: