Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLTGKQKRYLRSLAHNIDPIFQIGKGG------INENMIKQIDDTLENRE--------LIKVHVLQNNFDD--------KKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP------------
2LC0 Chain:A ((1-132))
MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETH
General information:
TITO was launched using:
RESULT:
Template:
2LC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23604 for 526 contacts (-44.9/contact) +
2D Compatibility (PS) -10450 + (NN) -4310 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -41864.0 ( -79.59 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_2LC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LC0-query.scw
PDB file :
Tito_Scwrl_2LC0.pdb
: