Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATTIIGIAGGSGSGKTTVTNEIMKNL--EGHSVALLAQDYYYK----DQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
1UEJ Chain:B ((24-232))
-----LIGVSGGTASGKSSVCAKIVQLLGQ-QKQVVILSQDSFYRVLTSEQKAKALKGQF--NFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN--
General information:
TITO was launched using:
RESULT:
Template:
1UEJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82791 for 1527 contacts (-54.2/contact) +
2D Compatibility (PS) -21225 + (NN) -8008 + (LL) 964
1D Compatibility (HY) -22000 + (ID) 4250
Total energy: -137310.0 ( -89.92 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1UEJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEJ-query.scw
PDB file :
Tito_Scwrl_1UEJ.pdb
: