Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPMRILDCKVDRDKEAIK---TAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK
4RDX Chain:A ((9-405))-----RGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEK-----------EMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWP-QPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRP-MLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEE---IGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPR-LRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGE---------------


General information:
TITO was launched using:
RESULT:

Template: 4RDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161973 for 3007 contacts (-53.9/contact) +
2D Compatibility (PS) -41435 + (NN) -14139 + (LL) 2052
1D Compatibility (HY) -26800 + (ID) 8350
Total energy: -250645.0 ( -83.35 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4RDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RDX-query.scw
PDB file : Tito_Scwrl_4RDX.pdb: