Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFT--SPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKN--DS---TNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKP---NVPVIYAVKNEDALKYVRERA--IEQHAKPIELDR---EIVVVS--QN-DEFTYRYKD--YELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIE-SVRWTGRIEQVH--DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGK----PINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIE-----NDEIQLVDDYVEFIKN----Y-QGDTLVITGSLYFISEVKSKLDFEAL |
| 3HN7 Chain:A ((103-487)) | --------------------------------------RHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIGGVPLVNTT------------DTNLQQVFAHS----SYL-----GTEKDDSD----------NSV-NTGYFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFD-------DLDAIQTQFHHMVRMIPSTGKIIMPAATISLEDTLAKGVWTPIWRTSVID---NSSDWQAELISADGSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNI------GVSVKTACAALSAFAGIKRRMELIGDVNDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPRSNTMKMGIHQDSLAQSATLADHTLWYEPTGLEW-GLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSNGGF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26725 for 2320 contacts (11.5/contact) +
2D Compatibility (PS) -32169 + (NN) 5258 + (LL) 7032
1D Compatibility (HY) 15600 + (ID) 1450
Total energy: 20996.0 ( 9.05 by residue)
QMean score : 0.134
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