Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPT-TLDYIPYIFD--SFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIG----IANKVLMLENSTYSVISPEGAAALLWKDSNLAKI----AAET---MKITAHDIKQLGIIDDVISEPLGGAHKDVEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE |
| 3N6R Chain:B ((297-519)) | -------------------------------------------------------------NPNTPYDMKELIHKLADEGDFYEIQEE--FA--KNIITGFIRLEGRTVGVVANQPL--------VLAGCLDIDSSRKAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVI---------QPRS----TRKRVARAFASLRNKSV------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98684 for 1661 contacts (-59.4/contact) +
2D Compatibility (PS) -22806 + (NN) -7088 + (LL) 6932
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -132696.0 ( -79.89 by residue)
QMean score : 0.488
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