Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEIVTVNIKPAVDQ-SVQSLKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRY-TWPKS |
1EE1 Chain:B ((2-271)) | ---MQEKIMRELHVKPSIDPKQEIEDRVNFLKQYVKK-TGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHG----EDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYL---------------------ISYDEIDDYLEGKEVSAKVSEALEKRYSMTEHKRQVPASMFDDWWK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68665 for 1906 contacts (-36.0/contact) +
2D Compatibility (PS) -26262 + (NN) -9839 + (LL) 964
1D Compatibility (HY) -16000 + (ID) 6000
Total energy: -125802.0 ( -66.00 by residue)
QMean score : 0.449
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