Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSI-----DLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQ-PSETKAYINVK-----
4LFU Chain:A ((5-240))-DFFSWRRTMLLRFQRM------------------------ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYP-------------EAWVSYYQAKNFLA---------------------------------IDPVLNPENFSQGHLMW----NDDLFSEAQPLWEAARAH----GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSI------SENTVNFHQKNMQKKINAPNKTQVACYAAATGLI


General information:
TITO was launched using:
RESULT:

Template: 4LFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32611 for 1624 contacts (20.1/contact) +
2D Compatibility (PS) -23538 + (NN) -4460 + (LL) 4652
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: 2165.0 ( 1.33 by residue)
QMean score : 0.164

(partial model without unconserved sides chains):
PDB file : Tito_4LFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LFU-query.scw
PDB file : Tito_Scwrl_4LFU.pdb: