Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEIE---GVSLFELQANQL--------KTLNHQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEG-KLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPK-PGESVGRLV--NVDCKDTVLEYSELDPEVANQ----------FNNANIGIHAFKLGFILNAV------NRELPYHLAIKNLKQLDENFGVIEQPT----LKFELFYFDIFTYG--TSFVTLQVPREEEFSPLKNKEG-KDSVATATEDLRRMGLI
2YQH Chain:B ((83-436))------------------------------------------------------------------------LSKDILQNWTELGLKAIGNGEVAVLLMA----------APKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFPSVELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRN-------


General information:
TITO was launched using:
RESULT:

Template: 2YQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115502 for 2339 contacts (-49.4/contact) +
2D Compatibility (PS) -33910 + (NN) -17987 + (LL) 6428
1D Compatibility (HY) -29200 + (ID) 5900
Total energy: -196071.0 ( -83.83 by residue)
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_2YQH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YQH-query.scw
PDB file : Tito_Scwrl_2YQH.pdb: