Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKN---DDAKNSIDPSTIKQIQIVVK
3R2T Chain:A ((161-249))
----------------------------------------------------IDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEG---SADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK
General information:
TITO was launched using:
RESULT:
Template:
3R2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14323 for 490 contacts (-29.2/contact) +
2D Compatibility (PS) -9448 + (NN) -2422 + (LL) 3212
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -30281.0 ( -61.80 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3R2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2T-query.scw
PDB file :
Tito_Scwrl_3R2T.pdb
: