Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQ-MENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED----IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEP--------VKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQK-DSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDS-DIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN |
| 1HP0 Chain:B ((15-280)) | --KNVVLDHDGNLDDFVAMVLLASNTEKVRLIGALCTDADCFVENGFNVTGKIMCLMHNNMNLPLFPIGKSAATAVNPFPKEWRCLAKNMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMN---SEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTH-----DGDGYYAWDALTAAYV--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131797 for 2164 contacts (-60.9/contact) +
2D Compatibility (PS) -25879 + (NN) -10318 + (LL) 4160
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -189584.0 ( -87.61 by residue)
QMean score : 0.453
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