Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNYTVKIKNSAKSDLRKIKHSYLKKSFLEI-VETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
3G5O Chain:B ((16-96))
-VPYTVRFTTTARRDLHKLPPR-ILAAVVEFAFGDLSREPLRV---GKPLRRELAGTFSARRG-TYRLLYRIDDEHTTVVILRVDHR--
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22771 for 536 contacts (-42.5/contact) +
2D Compatibility (PS) -8705 + (NN) -2016 + (LL) 504
1D Compatibility (HY) -8000 + (ID) 1000
Total energy: -41988.0 ( -78.34 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: