Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDY-QVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMV-DTAITAAYNPSDRKK----------LDPQDIAEAVLYALTQPKHVNVNEITVRPV
3ASV Chain:C ((2-236))
-------IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV
General information:
TITO was launched using:
RESULT:
Template:
3ASV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117493 for 1846 contacts (-63.6/contact) +
2D Compatibility (PS) -23643 + (NN) -3982 + (LL) 788
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -165630.0 ( -89.72 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3ASV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASV-query.scw
PDB file :
Tito_Scwrl_3ASV.pdb
: