Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
4A48 Chain:B ((6-64))
-----LQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGY---
General information:
TITO was launched using:
RESULT:
Template:
4A48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40827 for 402 contacts (-101.6/contact) +
2D Compatibility (PS) -6202 + (NN) -527 + (LL) 840
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -53016.0 ( -131.88 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4A48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A48-query.scw
PDB file :
Tito_Scwrl_4A48.pdb
: