Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
| 1YVW Chain:A ((4-95)) | ---------------------------------------------------------------------------------------------------------AFKLLYKTIEERKGSPLPESYTNYLFSKGEDKILKKIGEECAEVIIACKNNDKEEVVKEMVDVFYHCFVLLAEKNIALEDVMREVKERNGKL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6853 for 523 contacts (-13.1/contact) +
2D Compatibility (PS) -10041 + (NN) -5887 + (LL) 6608
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -21473.0 ( -41.06 by residue)
QMean score : 0.393
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