Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
| 1VZ0 Chain:E ((23-207)) | ----------------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRP-QGDGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEMG-LTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAE---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71633 for 1195 contacts (-59.9/contact) +
2D Compatibility (PS) -20323 + (NN) -12813 + (LL) 6084
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -117285.0 ( -98.15 by residue)
QMean score : 0.692
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