Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNAL-KKRPLIMGVSALTSFSEEEF--LMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
3UWQ Chain:B ((29-248))
-KVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHK--RGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAP-QDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIRPAGS----QRRIMTPAQAIASGSDYLVIGRPITQAAHP-EVVLEEINSS
General information:
TITO was launched using:
RESULT:
Template:
3UWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140920 for 1722 contacts (-81.8/contact) +
2D Compatibility (PS) -23270 + (NN) -7677 + (LL) 628
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -192039.0 ( -111.52 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3UWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWQ-query.scw
PDB file :
Tito_Scwrl_3UWQ.pdb
: