Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEER-------HKRLVVAQFDPFFPK--NP-FLKNDEILAINDYKIHSLA--EFEWVVSNLSYQSLAKVKIKRNHQIK------EVTLKVNKRYGGFLLKDTFLERYGIALD--------ERFIITKIGAHLPKGLDF-LKLGDRILWVNHKSVSFNP-KALREALS--TPKIELLVWRQGFEFYIKVR |
| 1P1D Chain:A ((36-212)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPK---------KHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDED------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73820 for 969 contacts (-76.2/contact) +
2D Compatibility (PS) -15418 + (NN) -2304 + (LL) 13104
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -85638.0 ( -88.38 by residue)
QMean score : 0.362
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