Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSAVALAFMLFAYRSLKEQNFFSASALLEALWFVGFFALFNYALKNPSRFYELFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQALFLSVLFAIIILVYLEAHVWCSLGALFLAFGFFKTWRSVVVICLKKCFALGFYKPFLLLVGFLNVSVTKALMDASMQEKQDLSLLLVVALFLCCVF----------IIGVPFFINALFRVQNSLKETYKLATNLSANLTQSAFQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFKVETTQLDVKIPNFKQKKVKKDTIDTKNEI |
| 4V0C Chain:A ((7-108)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHGSDYDDIFTTES---ALKVQQKQRQKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIEFSQLREHHRATIKVIRRMQYFVAKKKFQQARKP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7654 for 330 contacts (23.2/contact) +
2D Compatibility (PS) -8722 + (NN) -838 + (LL) 25756
1D Compatibility (HY) 1200 + (ID) 650
Total energy: 24400.0 ( 73.94 by residue)
QMean score : 0.320
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