Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPK------------------------------NEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESEKEYFQIAQKRLS
1G60 Chain:A ((5-255))
-NKIHQMNCFDFLDQVE--NKSVQLAVIDPPYNLSKADWDS--------FDSHNEFLAFT--YRWIDKVLDKLDKDGSLYIFNTPFNCAFICQYLVSKGMIFQNWITWDKRDGMG-SAKRRFSTGQETILFFSKSKNH-TFNYDEVRVPYESTDRIKHASEKGILKNGKRWFPNPNGRLCGEVW-HFS-----------TPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLN
General information:
TITO was launched using:
RESULT:
Template:
1G60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111979 for 1557 contacts (-71.9/contact) +
2D Compatibility (PS) -22049 + (NN) -11051 + (LL) 2564
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -159015.0 ( -102.13 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_1G60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G60-query.scw
PDB file :
Tito_Scwrl_1G60.pdb
: