Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLL--QRKFIGIDNSDLAIQACKNKLETI---TKDLFVSQNFYDFLVF |
| 3TM4 Chain:A ((198-280)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPAHLKASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15429 for 525 contacts (-29.4/contact) +
2D Compatibility (PS) -8559 + (NN) -5582 + (LL) 15536
1D Compatibility (HY) -800 + (ID) 900
Total energy: -15734.0 ( -29.97 by residue)
QMean score : 0.355
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