Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFKRKDNLALITELLNLDLFP--------IKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
2JI4 Chain:A ((92-153)) | --------------------------------------------------VNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQ--------SIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22896 for 246 contacts (-93.1/contact) +
2D Compatibility (PS) -4895 + (NN) -836 + (LL) 4024
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -28153.0 ( -114.44 by residue)
QMean score : 0.409
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