Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLDIKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQLIYESEVEKL
5ABX Chain:B ((1-41))
-----------GPHMIRYNRDTLMTARDAPIPDEMLQEINRVAPDILIA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
5ABX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4654 for 143 contacts (-32.5/contact) +
2D Compatibility (PS) -3851 + (NN) 851 + (LL) 2996
1D Compatibility (HY) -400 + (ID) 350
Total energy: -5408.0 ( -37.82 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_5ABX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ABX-query.scw
PDB file :
Tito_Scwrl_5ABX.pdb
: