Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKKMGL------NIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH--------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 3AEY Chain:A ((46-345)) | ---------------------------------------------------------------------------------------------RLYAKYEGLNPTGSFKDRGMTLAV---SKAVEG--GAQAVACASTGNTAASAA-AYAARAGILAIVVLPAGYVALGKVAQSLVH-GA--RIVQVEGNFDDALRLTQKLTEA-----------FPVALVNSVNPHRLEGQKTLAFEVVDELGD-------APHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVL----GRPV----ERPETLATAIRIGNPASWQGAVRAKEE-------------S---------------GGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATAERVAELPPPVPARLEAVAAAAGLL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89090 for 2552 contacts (-34.9/contact) +
2D Compatibility (PS) -30509 + (NN) -9957 + (LL) 14220
1D Compatibility (HY) -3200 + (ID) 2850
Total energy: -121386.0 ( -47.57 by residue)
QMean score : 0.337
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