Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLSIGNKIILCVALIVIVCVSILGVSLNSRVKEILKESALHSMQDSLHFKVKEVQSVLENTYTSMGIVKEMLPEDT-KREIKIQLLKNFILANSHVAGVSMFFKDREDLRLTLLRDNDTIKLMENPSLGSNPLAQKAMKNK--EISKSLPYYRKMPNGAEVYGVDILLPLFKENTQEVVGVLMIFFSIDSFSNEIT----KNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATNEVMAILE-NGSKATLEYLDPFSHKENFLAVETFKMLGKTESKDNLNWMIALIIEKDKVYEQVGSVRFVVVVASAIMVLALIIAITLLMRAIVSNRLEVVSSTLSHFFKLLNNQAHSSDIKLVEARSNDELGRMQTAINKNILQTQKTMQEDRQAVQDTIKVVSDVKAGNFAVRITAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKMLETSSNFAKDLANDSANLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGKDIKSIVEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF |
| 3LIF Chain:A ((6-246)) | ----------------------------------HKIALAQSETEMRNLSHSLAEHATHTFQGADVVLDDIVSFMKWRPHPSPVFNERLRALADNLPQLSDVAILDADGQL-----TYASVK--PVPALDNSDRSYFRYHRANDDHTLLITGPIQSRTSG---VWVFVVSRRLE-TTDGKFFGVVVATIESEYFSTFYKTFDLGPGGSISLLHSDGRLLIQWPSLQTGRDMAN---------MVLFQKALPRSPDGYYLTVSPFDGLTKYLAYRRVS---------RYPLVVTVARTEDSVLSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80509 for 1848 contacts (-43.6/contact) +
2D Compatibility (PS) -24932 + (NN) -5996 + (LL) 35656
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -84531.0 ( -45.74 by residue)
QMean score : 0.460
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