Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKELANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSLRFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAVGYSVKMEKFLLELVGRSVKEVRLIAASVNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLVTRPIEFQNERMQLLCVGKLECDYEGFFQTISKEE |
| 2CYY Chain:A ((6-56)) | ----------DEIDKKIIKIL-----QNDGKAPLREISKI--TGLAESTIHERIRKLRESGVIKKFTAIIDPEALGYSMLAFILVKVKAGKYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIGSIPGVEGTHTMIVLKTHKETTELPIK------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21389 for 300 contacts (-71.3/contact) +
2D Compatibility (PS) -5280 + (NN) -156 + (LL) 10564
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -18111.0 ( -60.37 by residue)
QMean score : 0.634
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