Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGK-AKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTLYPH--LLELIQSIKPFLKGVKTLILSNGS--------LFYEPKVQQALK-EFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 2A5H Chain:A ((104-317)) | ----------SPVPGLTHRYPDRVLLLIT-DMCSMYCRHCTRRRFAGQ---SDDSMPMERIDKAIDYIRNT--PQVRDVLLSG-GDALLVSDETLEYIIAKLREI-P--HVEIVRIGSRTPVVLPQRITPELVNMLKKYHPVWLNTHFNHPNEI------------TEESTRACQLLADA-GVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEPINYTPGCNCDVCTGKKKVHKVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59920 for 1528 contacts (-39.2/contact) +
2D Compatibility (PS) -21440 + (NN) -10515 + (LL) 2484
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -96191.0 ( -62.95 by residue)
QMean score : 0.341
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