Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------MKEKNFWPLGIMSVLI-FGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNT-------LYAQLQPLKPALDSPNIQVYLAFYP-SQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAF-FK--------------------------------------------------------- |
| 4Q4D Chain:A ((7-323)) | QIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPK-ECNLIEGEDHVEVNGEVFQK-----------PFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPT----DGTDVKVYTVGPDYAHAEARKSPALDGK----------VERDSEGK-EVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35969 for 1056 contacts (-34.1/contact) +
2D Compatibility (PS) -17873 + (NN) -2450 + (LL) 1392
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -62900.0 ( -59.56 by residue)
QMean score : 0.165
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