Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
| 3E4O Chain:A ((110-201)) | --------------------------------------------------SAEAAVIYLIDRSGVAVAASNWQEPT----------------SFVGNDYAFRDYFRLAVRDGM--AEHFAMGTVSKRPGLYISRRVDGP-GGPLGVIVAKLEFDGVEADWQASGKPAYVTDRRGIVLITSLPSWRFMTTKPIAEDRLAPIRESLQFGDAPLLPLPFRKIEARPDGSSTLDALLPGDSTAAFLRVETMVPSTNWRLEQLSPL--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35740 for 653 contacts (-54.7/contact) +
2D Compatibility (PS) -9835 + (NN) -816 + (LL) 10900
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -34391.0 ( -52.67 by residue)
QMean score : 0.296
|
|
|