Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKM--LLIDEDKKSPIHVSSSNYIIEAD-FELFAIALKNMIDNAIKYSDDK----QVFLDFIGNNLVVSNKSKPLKEDFEKYL---QPYFKSSNPSQAHGFGLGMYIIKNALEAMGLN--LSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 4OOU Chain:A ((20-383)) | ---SEFLKASG----SNFYYGGQKVFLSGVNFAWRSYGSDFGNGQ----------YASNGPALKDWINKVKASGG---NTARVWVHVEGQV-------SPAFDSHGFVTS---TDSKKTLINDLSDL----LDYANGQNVFLILVLFNGALQN-------NSNVQNLFW----------DESKLNSYINNA--LTPMVNALKSKPSLAAWEVLNEPEGTLQPGS-------DQNSCYDTST-----------------LAAQGAGWGGKKFPMKQILKTINWISSAIHNADSKALVTVGSWSELTQTDSFGYRNHYKDSCLTGAGGKSNGIINFYQMHTYSHSGKW---NQNAPFKVNRWAYNVNDKPLLIGEFASVCSQ-NEGIQNLYKYAYNNGYNGALTWQFNSGGDCSDTYSNQMYGMQALKGQNDQ---------SGGKGGMVSVNINH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108815 for 3192 contacts (-34.1/contact) +
2D Compatibility (PS) -36558 + (NN) 592 + (LL) 7788
1D Compatibility (HY) -7200 + (ID) 3550
Total energy: -147743.0 ( -46.29 by residue)
QMean score : 0.140
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